Metacells untangle large and complex single-cell transcriptome networksMetacells는 크고 복잡한 단일 세포 전사체 네트워크를 풉니다.Article Published on 2022-08-132022-09-11 Journal: BMC Bioinformatics [Category] 유전자 메커니즘, [키워드] accelerate analysis build Cell cell type cell type annotation cells Clustering Coarse-graining complex Computational biology construction correlation COVID-19 patient COVID-19 patients demonstrated develop differential expression downstream analyses downstream analysis facilitate framework heterogeneous IMPROVE imputation inherent integration Interpretation less Metacells offer populations redundancy RNA RNA sequencing scRNA-seq scRNA-seq data significantly single-cell Single-cell RNA sequencing Single-cell transcriptomics Single-cell transcriptomics. SuperCell tissue Transcriptome transcriptomic unique Visualization [DOI] 10.1186/s12859-022-04861-1 PMC 바로가기 [Article Type] Article
Exposing and Overcoming Limitations of Clinical Laboratory Tests in COVID-19 by Adding Immunological Parameters; A Retrospective Cohort Analysis and Pilot Study면역학적 매개변수를 추가하여 COVID-19에서 임상 실험실 테스트의 한계를 노출하고 극복합니다. 후향적 코호트 분석 및 파일럿 연구Article Published on 2022-06-292022-09-11 Journal: Frontiers in Immunology [Category] COVID19(2023년), MERS, SARS, 바이오마커, [키워드] acute phase acute phase reactants Adding adopted age Alanine alanine aminotransferase Algorithm Analysis aspartate Aspartate aminotransferase association Barcelona best Biomarker C-reactive protein category CCL2 chemokines classical clinical clinical and laboratory variables clinical laboratories clinical laboratory clinical laboratory tests Clinical management clinical parameter Clinical parameters clinical variable clinical variables Cohort collected Comorbidity conducted COVID 19 patient COVID 19 patients COVID-19 COVID-19 pandemic COVID-19 patient CXCL10 cytokine Cytokines exploratory feasible fibrinogen filtration rate First wave flow cytometry fraction glomerular filtration rate IL-1ra IL-6 immune response immunological Immunological test immunological tests IMPROVE independent Inflammation Interpretation Laboratory Laboratory test Laboratory tests limitation lymphocyte neutrophil organ organ damage outcome overcome oxygen oxygen saturation pandemic patients performed phenotype pilot study Predictive predictive power predictive risk-profile. predictor Prognosis redundancy reflected SARS-CoV-2 SARS-COV-2 infection severity statistical statistical analysis survival Test two subgroup two subgroups understanding validation cohort validation cohorts variable [DOI] 10.3389/fimmu.2022.902837 PMC 바로가기 [Article Type] Article
Model-Driven Impact Quantification of Energy Resource Redundancy and Server Rejuvenation on the Dependability of Medical Sensor Networks in Smart HospitalsArticle Published on 2022-02-182022-10-29 Journal: Sensors (Basel, Switzerland) [Category] Coronavirus, COVID19(2023년), MERS, SARS, [키워드] Analysis availability Characteristics component country COVID-19 Critical Dependability energy energy resources Government help highlight hospital hospitals Impact Internet of Things (IoT) Local Malfunction medical service network pandemic Pandemics Patient performed professionals redundancy Rejuvenation reliability resource sensitivity analysis sensor server SmaRT smart hospital SPN Spread stochastic Petri net Treatment virus [DOI] 10.3390/s22041595 PMC 바로가기 [Article Type] Article
SARS-CoV-2-Specific Immune Response and the Pathogenesis of COVID-19SARS-CoV-2-특이 면역 반응과 COVID-19의 병인Review Published on 2022-02-022022-09-10 Journal: International Journal of Molecular Sciences [Category] COVID19(2023년), MERS, SARS, 변종, 진단, [키워드] ACE2 acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 acute viral infection adaptive Adaptive immunity angiotensin Angiotensin-converting enzyme angiotensin-converting enzyme 2 Antiviral Autoimmune Autoimmunity blockade causative agent cell receptors cells cellular stress Characteristics complications of COVID-19 coronavirus coronavirus disease COVID-19 Critical Cytokines Engagement expressing Factor focus Immunity immunosuppressive include induce infect infected cell infected cells Infection Inflammation initial initial stages Innate immunity interferons Invasion invasion stage involved main receptor majority mechanism molecular mechanism molecular mechanisms overcome pathogenic pathogenicity pathway Post-COVID-19 syndrome Protein receptor receptors Recognition redundancy research finding research findings respiratory response SARS-CoV-2 severe acute respiratory syndrome Coronavirus Spike protein Stage superantigens systemic inflammation target cell the spike protein tissue variant variants Viral virulence virus [DOI] 10.3390/ijms23031716 PMC 바로가기 [Article Type] Review
Super interactive promoters provide insight into cell type-specific regulatory networks in blood lineage cell types슈퍼 대화식 프로모터는 혈액 계통 세포 유형에서 세포 유형-특이 적 조절 네트워크에 대한 통찰력을 제공Research Article Published on 2022-01-312022-09-06 Journal: PLoS Genetics [Category] Communicable Disease, [키워드] Analysis analysis ATAC-seq binding Blood blood cell Blood cells capture CD4 Cell cell type cell types chromatin compendium complex Critical disrupt driven by enhancer enhancers EPHB3 ETS1 explain Express expression level FIVE Follow-up functional Genetic variant GWAS GWAS variant GWAS variants help hematological hypothese identify implication include independent Interaction interactions interactivity Interpretation Lineage locus lymphocyte Lymphocyte count motifs norm overlap Phenotypes PIR Platelet Platelet count promoter promoters provide redundancy Region regions Regulatory regulatory network regulatory region resource strong interactions traits transcription factor transcriptional transcriptional regulation variant variants [DOI] 10.1371/journal.pgen.1009984 PMC 바로가기 [Article Type] Research Article
How informative were early SARS-CoV-2 treatment and prevention trials? a longitudinal cohort analysis of trials registered on ClinicalTrials.gov초기 SARS-COV-2 치료 및 예방 시험은 얼마나 유익 했습니까?ClinicalTrials.gov에 등록 된 시험의 종단 코호트 분석Research Article Published on 2022-01-212022-09-10 Journal: PLoS ONE [Category] SARS, 임상, 치료제, [키워드] amplified Arm Behavioural intervention behavioural interventions Characteristics Clinical research ClinicalTrials Cohort cohort analysis confidence confidence interval COVID COVID-19 criteria drug Efficacy eligibility criteria eligible evaluated exceptional excluded FDA feasibility food Guidance initiated interval over pandemic phase Phase 2 Prevalence Primary outcome proportion recommendation recruitment redundancy Registered regulated reported Research Result SARS-CoV-2 SARS-CoV-2 pandemic SARS-CoV-2 treatment the SARS-CoV-2 Timeliness Treatment treatment regimen Trial trials U.S. Food and Drug Administration [DOI] 10.1371/journal.pone.0262114 PMC 바로가기 [Article Type] Research Article
Analysis of the initial lot of the CDC 2019-Novel Coronavirus (2019-nCoV) real-time RT-PCR diagnostic panelCDC 2019- 노벨 코로나 바이러스 (2019-NCOV) 실시간 RT-PCR 진단 패널의 초기 로트 분석Research Article Published on 2021-12-152022-08-13 Journal: PLoS ONE [Category] Biochemistry, MERS, SARS, 치료기술, 치료법, 치료제, [키워드] 2019-nCoV 3’ end absence addition age amplification Base pairing caused CDC center conducted Contamination Control coronavirus COVID-19 pandemic diagnostic disease control distribution examined False positive False-positive fluorescent Frequency handling identify improvement Improvements increase initial lab Laboratory loci Mutation Novel coronavirus Nucleocapsid gene occurred Panel prevention primer probe probes problem problems public health Quality assurance Quality control reactivity reagent real-time RT-PCR redundancy reported Research resulting reverse primer RT-PCR SARS-CoV-2 detection sensitivity Viral virus detection [DOI] 10.1371/journal.pone.0260487 PMC 바로가기 [Article Type] Research Article
Rapid, Affordable, and Scalable SARS-CoV-2 Detection From Saliva타액에서 빠르고 저렴하며 확장 가능한 SARS-CoV-2 감지Article Published on 2021-09-012022-09-11 Journal: Journal of biomolecular techniques : JBT [Category] SARS, 치료기술, [키워드] 384-well format acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 Combination coronavirus detection determine extraction extraction-free detection fluorescent fluorescent dye Fluorescent LAMP isothermal amplification lab LAMP less Loop-mediated isothermal amplification Patient pH indicator phenol Phenol red point-of-care provide Rapid reaction reagent real time reduce redundancy reporter robust RT-LAMP Saliva saliva detection. SARS-CoV-2 setup severe acute respiratory syndrome Coronavirus [DOI] 10.7171/jbt.21-3203-010 PMC 바로가기 [Article Type] Article
One swab, two tests: Validation of dual SARS-CoV-2 testing on the Abbott ID NOW™면봉 1개, 테스트 2개: Abbott ID NOW™에 대한 이중 SARS-CoV-2 테스트 검증Article Published on 2021-08-012022-09-11 Journal: Journal of Clinical Virology [Category] MERS, SARS, 진단, 치료기술, 치료제, [키워드] Abbott Abbott Diagnostics Abbott ID NOW™ COVID-19 approach assays Care Chain Reaction collected comparator COVID-19 detect False negative false negatives heat inactivation hospital house individual less material media Patient PCR assay PCR testing POCT point-of-care testing point-of-care tests polymerase chain polymerase chain reaction positive raised redundancy respiratory reverse transcription rRT-PCR rRT-PCR testing SARS-CoV-2 SARS-CoV-2 particle SARS-CoV-2 testing SARS-CoV-2. second Swab tested Transport media USA validation was tested were used [DOI] 10.1016/j.jcv.2021.104896 PMC 바로가기 [Article Type] Article
Virtual screening of peptides with high affinity for SARS-CoV-2 main proteaseSARS-CoV-2 주요 프로테아제에 대한 높은 친화도를 갖는 펩타이드의 가상 스크리닝Article Published on 2021-06-012022-09-11 Journal: Computers in biology and medicine [Category] SARS, 신약개발, 치료제, [키워드] acute respiratory syndrome acute respiratory syndrome coronavirus acute respiratory syndrome coronavirus 2 Algorithm API applied caused coronavirus COVID-19 COVID-19 treatment death docking docking score drug Drug repurposing Genetic Genetic algorithm high affinity higher affinity identify M pro molecular docking over pandemic pentapeptide peptide peptide-based peptides Proteases redundancy RESTful API. SARS-CoV-2 SARS-CoV-2 main protease screened selected severe acute respiratory syndrome Coronavirus solution treat Treatment Vaccine development Virtual screening [DOI] 10.1016/j.compbiomed.2021.104363 PMC 바로가기 [Article Type] Article